Methanosarcina lacustris Z-7289

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanosarcinales

Family

Methanosarcinaceae

Genus

Methanosarcina

Description

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanosarcinales
FamilyMethanosarcinaceae
GenusMethanosarcina
SpeciesMethanosarcina lacustris
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methanosarcina lacustris Z-7289

Accession NumberNZ_CP009515.1

Gene Summary

Adenine Count

1207815 bp

Thymine Count

1200610 bp

Guanine Count

865468 bp

Cytosine Count

865915 bp

Genome Length

4139808 bp

Protein-coding Genes

3454 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cdc48 family aaa atpaseMSLAZ_RS10855Not Available+2654604 - 265689884674.6
cbs domain-containing proteinMSLAZ_RS10860Not Available+2657306 - 265786620388.1
alanine--glyoxylate aminotransferase family proteinMSLAZ_RS10865Q58369+2658196 - 265934741523.4
riboflavin synthaseMSLAZ_RS10870O26237+2659439 - 265990317064.0
6,7-dimethyl-8-ribityllumazine synthaseMSLAZ_RS10875Q8Q093+2659944 - 266034814855.3
pyridoxal phosphate-dependent aminotransferaseMSLAZ_RS10880Not Available+2660406 - 266154841658.9
adenylyltransferase/cytidyltransferase family proteinMSLAZ_RS10885Q8TPT5-2661625 - 266208017109.9
l-aspartate semialdehyde sulfurtransferaseMSLAZ_RS10890Q8TPT4+2662626 - 266412854170.9
4fe-4s binding proteinMSLAZ_RS10895Q8TPT3+2664131 - 266451714301.5
monomethylamine:corrinoid methyltransferaseMSLAZ_RS10905Not Available+2664798 - 266565533137.6

Displaying genes 2231 – 2240 of 3517 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

165 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000344(2R,3S)-homoisocitrateC7H7O7Chemical structure of (2R,3S)-homoisocitrateNot available
Average203.128Da
Monoisotopic203.020823305Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000515mycothioneC34H58N4O24S2Chemical structure of mycothioneNot available
Average970.96Da
Monoisotopic970.2882411Da
BASm0000908propanoateC3H5O2Chemical structure of propanoateNot available
Average73.072Da
Monoisotopic73.029502981Da
BASm0001035indole-3-pyruvateC11H8NO3Chemical structure of indole-3-pyruvate35656-49-6
Average202.1861Da
Monoisotopic202.0504181Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da

Displaying 1–10 of 165 metabolites