Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bacterioferritin | MSHOH_RS00195 | Not Available | - | 49687 - 50211 | 20266.1 |
| yip1 family protein | MSHOH_RS00200 | Not Available | + | 50636 - 51220 | 21214.0 |
| Trna-cys | Not Available | Not Available | + | 51362 - 51433 | Not Available |
| Trna-cys | Not Available | Not Available | + | 51504 - 51575 | Not Available |
| endonuclease iii | MSHOH_RS00215 | Q9WYK0 | + | 51752 - 52369 | 23553.7 |
| bifunctional 5,6,7,8-tetrahydromethanopterin hydro-lyase/3-hexulose-6-phosphate synthase | MSHOH_RS00220 | Q8PXE1 | + | 52633 - 53811 | 42409.4 |
| triose-phosphate isomerase | MSHOH_RS00225 | Q8THB0 | + | 54003 - 54671 | 22858.6 |
| fmde family protein | MSHOH_RS00230 | Not Available | + | 55290 - 55934 | 23955.6 |
| abc transporter substrate-binding protein | MSHOH_RS00235 | A5VU91 | + | 55937 - 57688 | 64530.8 |
| abc transporter permease | MSHOH_RS00240 | Not Available | + | 57705 - 58703 | 37279.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.