Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 4 protein | MSHOH_RS04450 | Not Available | - | 994140 - 995963 | 67375.8 |
| duf1638 domain-containing protein | MSHOH_RS04455 | Not Available | - | 996238 - 997044 | 30026.6 |
| duf1772 domain-containing protein | MSHOH_RS24990 | Not Available | - | 997498 - 997797 | 10669.2 |
| abc transporter atp-binding protein | MSHOH_RS04465 | O31723 | - | 998184 - 999002 | 30365.0 |
| hypothetical protein | MSHOH_RS04470 | Not Available | + | 999660 - 1000016 | 13622.0 |
| gnat family n-acetyltransferase | MSHOH_RS04475 | P13857 | - | 1000158 - 1000652 | 19354.4 |
| dna alkylation repair protein | MSHOH_RS04480 | Not Available | + | 1000784 - 1001515 | 28521.2 |
| crispr-associated carf protein csa3 | MSHOH_RS04485 | Not Available | - | 1002075 - 1002677 | 22006.6 |
| tigr02556 family crispr-associated protein | MSHOH_RS04490 | Not Available | + | 1002894 - 1004762 | 72798.8 |
| type i-b crispr-associated protein cas7/csh2 | MSHOH_RS04495 | D4GQN6 | + | 1004755 - 1005732 | 37016.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.