Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| xtp/ditp diphosphatase | MSHOH_RS04355 | Q8PZ91 | - | 974586 - 975140 | 20666.6 |
| bifunctional n(6)-l-threonylcarbamoyladenine synthase/serine/threonine protein kinase | MSHOH_RS04360 | Q8PZ92 | - | 975133 - 976821 | 62122.9 |
| tetratricopeptide repeat protein | MSHOH_RS04365 | Not Available | - | 976930 - 979992 | 114042.0 |
| hypothetical protein | MSHOH_RS23405 | Not Available | - | 980325 - 980495 | 6609.6 |
| hypothetical protein | MSHOH_RS23410 | Not Available | - | 980497 - 980637 | 5426.12 |
| 30s ribosomal protein s27ae | MSHOH_RS04375 | Q8TJT1 | - | 981028 - 981177 | 5572.83 |
| 30s ribosomal protein s24e | MSHOH_RS04380 | Q8PZ95 | - | 981199 - 981504 | 11580.0 |
| gtp-dependent dephospho-coa kinase family protein | MSHOH_RS04385 | Q8PZ96 | - | 981485 - 982072 | 21827.7 |
| transcription elongation factor subunit spt4 | MSHOH_RS04390 | Q8U440 | - | 982074 - 982259 | 6826.38 |
| dna-directed rna polymerase | MSHOH_RS04395 | Q57840 | - | 982291 - 982875 | 21454.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.