Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | MSHOH_RS04105 | P39631 | + | 923908 - 924711 | 30024.9 |
| sugar phosphate nucleotidyltransferase | MSHOH_RS04110 | Not Available | + | 924708 - 925430 | 26339.7 |
| flippase | MSHOH_RS04115 | Not Available | + | 925437 - 926864 | 53486.3 |
| glycosyltransferase | MSHOH_RS04120 | Not Available | + | 927128 - 927934 | 30392.4 |
| glycosyltransferase family 1 protein | MSHOH_RS04125 | Not Available | + | 928253 - 929365 | 42381.7 |
| glycosyltransferase family 2 protein | MSHOH_RS21910 | D4GYG7 | + | 929362 - 930270 | 33955.9 |
| glycosyltransferase family 2 protein | MSHOH_RS04135 | Not Available | + | 930270 - 931163 | 34464.8 |
| glycosyltransferase family 4 protein | MSHOH_RS04140 | Not Available | - | 931181 - 932275 | 41431.2 |
| glycosyltransferase | MSHOH_RS04145 | Not Available | + | 932365 - 933519 | 43744.2 |
| oligosaccharyl transferase, archaeosortase a system-associated | MSHOH_RS04150 | Not Available | + | 933574 - 936102 | 94278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.