Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| co dehydrogenase/acetyl-coa synthase complex subunit epsilon | MSHOH_RS03900 | Not Available | - | 874668 - 875180 | 18338.2 |
| co dehydrogenase/acetyl-coa synthase complex subunit alpha | MSHOH_RS03905 | Not Available | - | 875183 - 877600 | 87694.6 |
| rhomboid family intramembrane serine protease | MSHOH_RS03910 | Not Available | + | 879107 - 879775 | 25338.5 |
| hypothetical protein | MSHOH_RS03915 | Not Available | + | 879772 - 880200 | 16796.2 |
| tigr00288 family nyn domain-containing protein | MSHOH_RS03925 | Not Available | + | 880640 - 881221 | 21964.0 |
| methanogenesis marker 12 protein | MSHOH_RS03930 | Q8TJD0 | - | 881265 - 882242 | 34933.2 |
| duf2103 domain-containing protein | MSHOH_RS03935 | Not Available | - | 882266 - 882619 | 12517.3 |
| act domain-containing protein | MSHOH_RS03945 | Not Available | - | 882977 - 883414 | 16073.6 |
| phenylacetate--coa ligase family protein | MSHOH_RS03950 | Q72K16 | - | 883777 - 885081 | 48738.6 |
| bifunctional oligoribonuclease/pap phosphatase nrna | MSHOH_RS03955 | Q58395 | - | 885514 - 886518 | 35948.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.