Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | MSHOH_RS03610 | Not Available | - | 806994 - 808211 | 43225.6 |
| ammonium transporter | MSHOH_RS03615 | Q07429 | - | 808806 - 810020 | 43189.7 |
| ammonium transporter | MSHOH_RS03620 | O28525 | - | 810338 - 811531 | 41605.4 |
| p-ii family nitrogen regulator | MSHOH_RS03625 | Q8PYW7 | - | 811543 - 811887 | 12570.3 |
| class i sam-dependent methyltransferase | MSHOH_RS03630 | Not Available | + | 812052 - 812981 | 34372.3 |
| hypothetical protein | MSHOH_RS03640 | Not Available | - | 813866 - 814846 | 35921.5 |
| abc transporter atp-binding protein | MSHOH_RS03645 | Q53194 | - | 814924 - 815916 | 37147.1 |
| abc transporter atp-binding protein | MSHOH_RS03650 | A5VU87 | - | 815834 - 816799 | 35516.3 |
| nickel transporter permease | MSHOH_RS03655 | P0AFB0 | - | 816814 - 817713 | 32318.9 |
| abc transporter permease | MSHOH_RS03660 | Not Available | - | 817706 - 818665 | 34925.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.