Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methanogenesis marker 2 protein | MSHOH_RS03410 | Q58057 | - | 769418 - 770398 | 35099.7 |
| 4fe-4s binding protein | MSHOH_RS03415 | Q01700 | + | 770884 - 771060 | 5826.68 |
| nitrogenase cofactor biosynthesis protein nifb | MSHOH_RS03420 | P20627 | - | 771179 - 772150 | 36088.8 |
| 6-carboxytetrahydropterin synthase qued | MSHOH_RS03425 | O29809 | - | 772529 - 772882 | 13643.3 |
| 7-carboxy-7-deazaguanine synthase quee | MSHOH_RS03430 | Q8TIF5 | - | 773053 - 773820 | 28693.6 |
| duf366 family protein | MSHOH_RS03435 | Q58215 | - | 773821 - 774381 | 21141.3 |
| 7-cyano-7-deazaguanine synthase quec | MSHOH_RS03440 | Q8TIF3 | - | 774466 - 775161 | 25499.2 |
| metallophosphoesterase | MSHOH_RS03445 | Q58346 | + | 775380 - 775880 | 18026.8 |
| hypothetical protein | MSHOH_RS24980 | Not Available | + | 776228 - 776404 | 6546.68 |
| s-layer protein domain-containing protein | MSHOH_RS03460 | Q8TSG7 | + | 776745 - 780047 | 122328.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.