Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | MSHOH_RS00245 | P0AEG3 | + | 58706 - 59530 | 30049.4 |
| abc transporter atp-binding protein | MSHOH_RS00250 | P77268 | + | 59530 - 60483 | 35835.3 |
| abc transporter atp-binding protein | MSHOH_RS00255 | P45094 | + | 60486 - 61313 | 30026.6 |
| heat repeat domain-containing protein | MSHOH_RS00260 | Not Available | - | 61451 - 63010 | 55723.0 |
| prephenate dehydrogenase | MSHOH_RS00265 | Q58029 | - | 63082 - 64593 | 56770.5 |
| shikimate dehydrogenase | MSHOH_RS00270 | Q8THC3 | - | 64596 - 65435 | 29395.7 |
| type i 3-dehydroquinate dehydratase | MSHOH_RS00275 | Q8PXE7 | - | 65432 - 66160 | 26205.0 |
| 3-dehydroquinate synthase ii | MSHOH_RS00280 | Q8PXE8 | - | 66260 - 67402 | 41284.7 |
| 2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthase | MSHOH_RS00285 | Q57843 | - | 67548 - 68345 | 28740.9 |
| gmp synthase subunit a | MSHOH_RS00290 | Q8THC7 | + | 68814 - 69383 | 21195.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.