Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyrimidine dimer dna glycosylase/endonuclease v | MSHOH_RS02885 | Not Available | + | 663748 - 664077 | 12863.7 |
| permease | MSHOH_RS02890 | Not Available | - | 664088 - 664723 | 23547.8 |
| hypothetical protein | MSHOH_RS23345 | Not Available | + | 664727 - 665137 | 14895.5 |
| padr family transcriptional regulator | MSHOH_RS02900 | Not Available | - | 665238 - 665573 | 13167.0 |
| hypothetical protein | MSHOH_RS02910 | Not Available | + | 666127 - 666723 | 23084.9 |
| carboxymuconolactone decarboxylase family protein | MSHOH_RS02915 | Not Available | + | 666760 - 667089 | 11587.5 |
| lim domain-containing protein | MSHOH_RS02920 | Not Available | + | 667108 - 667506 | 14754.5 |
| coenzyme f390 synthetase | MSHOH_RS02925 | Not Available | + | 667738 - 669096 | 51288.8 |
| nickel-responsive transcriptional regulator nikr | MSHOH_RS02930 | Not Available | + | 669422 - 669844 | 15781.9 |
| helix-turn-helix transcriptional regulator | MSHOH_RS02935 | Not Available | - | 669945 - 670301 | 13507.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.