Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stress response translation initiation inhibitor ycih | MSHOH_RS02820 | Q8PYK3 | + | 653414 - 653722 | 11382.8 |
| transcriptional regulator | MSHOH_RS02825 | Not Available | + | 653928 - 654293 | 13499.4 |
| nre family dna repair protein | MSHOH_RS02830 | A0A1B2LS07 | + | 654290 - 655516 | 45801.3 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | MSHOH_RS02835 | Q8TIS9 | - | 655703 - 656416 | 26974.8 |
| atp-binding protein | MSHOH_RS02845 | Q9V287 | + | 656896 - 658182 | 48912.0 |
| mbl fold metallo-hydrolase | MSHOH_RS02850 | Q7MUY1 | + | 658179 - 658919 | 27841.6 |
| is200/is605 family element rna-guided endonuclease tnpb | MSHOH_RS02855 | Not Available | + | 659075 - 660190 | 42858.9 |
| duf378 domain-containing protein | MSHOH_RS02870 | Not Available | + | 661399 - 661632 | 8435.55 |
| peroxiredoxin | MSHOH_RS02875 | Q9ZMU4 | - | 661890 - 662372 | 18362.0 |
| hypothetical protein | MSHOH_RS02880 | Not Available | - | 662565 - 663545 | 35723.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.