Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| presenilin family intramembrane aspartyl protease psh | MSHOH_RS02555 | Not Available | - | 589050 - 589943 | 32441.2 |
| hypothetical protein | MSHOH_RS02560 | Not Available | + | 590462 - 590797 | 13155.0 |
| hypothetical protein | MSHOH_RS02565 | Not Available | + | 591791 - 592093 | 11159.7 |
| flap endonuclease-1 | MSHOH_RS02570 | Q8PYF6 | + | 592657 - 593673 | 37592.9 |
| cation diffusion facilitator family transporter | MSHOH_RS02575 | P9WGF4 | + | 593786 - 594793 | 36368.9 |
| beta-ribofuranosylaminobenzene 5'-phosphate synthase | MSHOH_RS02580 | O28190 | - | 594841 - 595803 | 34535.8 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | MSHOH_RS02585 | Q8PYF8 | - | 596099 - 597646 | 57095.0 |
| acetate uptake transporter | MSHOH_RS02590 | Not Available | + | 597920 - 598528 | 21655.9 |
| class i sam-dependent methyltransferase | MSHOH_RS02595 | Not Available | + | 598767 - 599606 | 32435.6 |
| had-ic family p-type atpase | MSHOH_RS02600 | P63688 | - | 599628 - 602462 | 102549.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.