Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'/3'-nucleotidase sure | MSHOH_RS21405 | Q8TUG3 | - | 4911539 - 4912342 | 29164.7 |
| acetate uptake transporter | MSHOH_RS21410 | P0AC99 | + | 4912732 - 4913322 | 20871.3 |
| nucleotidyltransferase family protein | MSHOH_RS25465 | Not Available | - | 4914809 - 4914946 | 5039.02 |
| cpbp family intramembrane glutamic endopeptidase | MSHOH_RS21425 | Not Available | + | 4915181 - 4915981 | 29965.1 |
| hi0074 family nucleotidyltransferase substrate-binding subunit | MSHOH_RS21430 | Not Available | - | 4916112 - 4916432 | 12763.2 |
| glycine--trna ligase | MSHOH_RS21435 | A0B5U4 | + | 4916853 - 4918694 | 69606.5 |
| dead/deah box helicase | MSHOH_RS21440 | Q58900 | + | 4918928 - 4921477 | 94787.2 |
| hypothetical protein | MSHOH_RS24150 | Not Available | - | 4921753 - 4921935 | 7185.32 |
| sjogren's syndrome/scleroderma autoantigen 1 family protein | MSHOH_RS21450 | Not Available | - | 4922816 - 4923442 | 23462.7 |
| upf0147 family protein | MSHOH_RS21455 | Q8TUH5 | + | 4923689 - 4923961 | 10079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.