Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | MSHOH_RS20875 | Not Available | - | 4800664 - 4801656 | 38122.4 |
| tetratricopeptide repeat protein | MSHOH_RS20885 | Not Available | + | 4802355 - 4803287 | 35460.6 |
| nad(p)h-dependent oxidoreductase | MSHOH_RS20890 | P45245 | - | 4803302 - 4803910 | 23118.7 |
| atp-binding protein | MSHOH_RS20895 | Not Available | + | 4804187 - 4805530 | 49962.1 |
| 3-isopropylmalate dehydratase small subunit | MSHOH_RS20900 | Q8PWT6 | + | 4805761 - 4806249 | 17796.0 |
| isocitrate/isopropylmalate dehydrogenase family protein | MSHOH_RS20905 | Q47SB4 | + | 4806345 - 4807472 | 41365.3 |
| gnat family n-acetyltransferase | MSHOH_RS22420 | Not Available | + | 4807782 - 4808846 | 40682.0 |
| hypothetical protein | MSHOH_RS20915 | Not Available | + | 4809043 - 4809360 | 12087.3 |
| class i sam-dependent methyltransferase | MSHOH_RS20925 | Q923W1 | + | 4809619 - 4810659 | 39197.8 |
| alanine--trna ligase | MSHOH_RS20930 | Q8PWU0 | - | 4810788 - 4813568 | 103852.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.