Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asp | Not Available | Not Available | + | 4791457 - 4791529 | Not Available |
| hypothetical protein | MSHOH_RS20830 | Not Available | + | 4791768 - 4792430 | 26118.9 |
| xaa-pro peptidase family protein | MSHOH_RS20835 | Q2FG30 | + | 4792599 - 4793780 | 43837.7 |
| type ii methionyl aminopeptidase | MSHOH_RS20840 | O28438 | + | 4793982 - 4794872 | 32209.5 |
| hypothetical protein | MSHOH_RS20845 | Not Available | + | 4794953 - 4795762 | 30239.0 |
| yunc family protein | MSHOH_RS20850 | Not Available | + | 4795804 - 4796091 | 10432.0 |
| trm11 family methyltransferase | MSHOH_RS20855 | O26820 | + | 4796450 - 4797496 | 38397.8 |
| trna pseudouridine(38-40) synthase trua | MSHOH_RS20860 | Q8TU65 | - | 4797609 - 4798418 | 30690.7 |
| transcriptional regulator | MSHOH_RS20865 | Not Available | - | 4798430 - 4799386 | 34381.1 |
| formate-- phosphoribosylaminoimidazolecarboxamide ligase | MSHOH_RS20870 | Q8TU67 | + | 4799586 - 4800656 | 40152.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.