Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilin | MSHOH_RS20770 | O29169 | - | 4780717 - 4781172 | 15959.2 |
| type iv pilin n-terminal domain-containing protein | MSHOH_RS20775 | Not Available | + | 4781473 - 4782474 | 36716.6 |
| hypothetical protein | MSHOH_RS20780 | Not Available | + | 4782514 - 4783446 | 34693.7 |
| hypothetical protein | MSHOH_RS20785 | Not Available | + | 4783630 - 4785183 | 56902.0 |
| formate dehydrogenase accessory sulfurtransferase fdhd | MSHOH_RS20790 | Q5WJL4 | + | 4785285 - 4786028 | 27174.8 |
| imidazoleglycerol-phosphate dehydratase hisb | MSHOH_RS20795 | Q8PWS1 | - | 4786067 - 4786642 | 20940.2 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | MSHOH_RS20800 | Q8PWS2 | - | 4786798 - 4787535 | 25668.2 |
| atp phosphoribosyltransferase | MSHOH_RS20805 | Q8TU56 | - | 4787638 - 4788507 | 31398.4 |
| methionine adenosyltransferase | MSHOH_RS20810 | Q8TU57 | + | 4789072 - 4790268 | 44081.9 |
| protease inhibitor i42 family protein | MSHOH_RS20815 | Not Available | - | 4790633 - 4790971 | 12872.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.