Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (r)-s-oxide reductase msrb | MSHOH_RS20015 | Q46EH1 | - | 4604337 - 4604759 | 16114.7 |
| hypothetical protein | MSHOH_RS20020 | Not Available | + | 4605012 - 4605461 | 17146.1 |
| abc transporter permease | MSHOH_RS20025 | Q6MPX9 | - | 4605563 - 4606774 | 43341.7 |
| toll/interleukin-1 receptor domain-containing protein | MSHOH_RS20030 | Not Available | + | 4607015 - 4608304 | 51533.6 |
| gnat family n-acetyltransferase | MSHOH_RS25785 | Not Available | + | 4608388 - 4608864 | 17330.8 |
| flavodoxin family protein | MSHOH_RS20035 | Not Available | - | 4608932 - 4609555 | 22941.7 |
| hypothetical protein | MSHOH_RS20040 | Not Available | - | 4609749 - 4610495 | 26032.8 |
| duf2341 domain-containing protein | MSHOH_RS20045 | Q58865 | - | 4610996 - 4613119 | 78733.5 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | MSHOH_RS20050 | Q8PWG1 | + | 4613407 - 4613922 | 19163.0 |
| 2-amino-3,7-dideoxy-d-threo-hept-6-ulosonate synthase | MSHOH_RS20055 | A9A799 | + | 4614023 - 4614826 | 28152.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.