Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4fe-4s binding protein | MSHOH_RS19950 | Not Available | + | 4592953 - 4593132 | 6142.14 |
| dna-deoxyinosine glycosylase | MSHOH_RS19955 | Q8TTH3 | - | 4593226 - 4593702 | 18334.1 |
| winged helix-turn-helix domain-containing protein | MSHOH_RS19960 | Not Available | - | 4593855 - 4594646 | 30879.8 |
| winged helix-turn-helix domain-containing protein | MSHOH_RS19965 | Not Available | - | 4594926 - 4595732 | 31196.5 |
| methanol--corrinoid protein mtac | MSHOH_RS19975 | Q46EH4 | + | 4596717 - 4597493 | 27704.3 |
| methanol--corrinoid protein co-methyltransferase mtab | MSHOH_RS19980 | Q46EH3 | + | 4597504 - 4598889 | 50355.1 |
| php domain-containing protein | MSHOH_RS19985 | Not Available | - | 4598953 - 4599951 | 37549.8 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | MSHOH_RS19995 | Q8PZB2 | + | 4600710 - 4601876 | 43159.9 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | MSHOH_RS20000 | Q8TTI1 | + | 4601933 - 4603072 | 42325.7 |
| had family phosphatase | MSHOH_RS20005 | Q9HJW8 | - | 4603174 - 4603833 | 24590.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.