Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSHOH_RS19900 | Not Available | - | 4576830 - 4577723 | 32239.6 |
| methyl-accepting chemotaxis protein | MSHOH_RS19905 | Q9I055 | - | 4578093 - 4580090 | 73253.1 |
| sensor histidine kinase | MSHOH_RS23260 | Not Available | - | 4580543 - 4580905 | 13509.2 |
| sensor histidine kinase | MSHOH_RS22410 | Not Available | - | 4580907 - 4581368 | 18650.6 |
| aaa family atpase | MSHOH_RS19915 | Not Available | - | 4581554 - 4582741 | 45105.3 |
| fad-dependent oxidoreductase | MSHOH_RS19920 | Not Available | + | 4583097 - 4584641 | 57196.7 |
| fad-dependent oxidoreductase | MSHOH_RS19925 | O07622 | + | 4584686 - 4586206 | 56179.1 |
| swim zinc finger domain-containing protein | MSHOH_RS19930 | Not Available | + | 4586244 - 4588211 | 75398.4 |
| bifunctional polysaccharide deacetylase/glycosyltransferase family 2 protein | MSHOH_RS19940 | Not Available | + | 4589770 - 4591860 | 79140.6 |
| hypothetical protein | MSHOH_RS19945 | Not Available | + | 4591860 - 4592645 | 29824.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.