Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biotin--[acetyl-coa-carboxylase] ligase | MSHOH_RS18920 | P0CI75 | - | 4344669 - 4345646 | 36057.1 |
| acetyl-coa carboxylase biotin carboxylase subunit | MSHOH_RS18925 | O27939 | - | 4345764 - 4347245 | 54037.1 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | MSHOH_RS18930 | O27179 | - | 4347268 - 4348989 | 63327.7 |
| hypothetical protein | MSHOH_RS18935 | Not Available | - | 4349011 - 4349193 | 6809.36 |
| class i sam-dependent methyltransferase | MSHOH_RS18940 | Not Available | - | 4349475 - 4350446 | 36218.5 |
| histone family protein | MSHOH_RS18945 | P50485 | + | 4350774 - 4350998 | 8120.98 |
| 4fe-4s binding protein | MSHOH_RS18950 | Not Available | - | 4351261 - 4351524 | 9297.35 |
| small multi-drug export protein | MSHOH_RS18955 | Not Available | - | 4351699 - 4352211 | 18520.3 |
| replication factor c small subunit | MSHOH_RS18960 | Q8TSX5 | - | 4352338 - 4353342 | 37664.0 |
| duf4870 domain-containing protein | MSHOH_RS18965 | Q58838 | - | 4353655 - 4353990 | 12618.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.