Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| exosome complex rna-binding protein csl4 | MSHOH_RS18720 | O30033 | - | 4301397 - 4302371 | 36287.1 |
| mettl5 family protein | MSHOH_RS18725 | Q57732 | - | 4302781 - 4303374 | 22251.9 |
| diphthamide biosynthesis enzyme dph2 | MSHOH_RS18730 | O58832 | - | 4303442 - 4304449 | 36887.5 |
| hypoxanthine/guanine phosphoribosyltransferase | MSHOH_RS18735 | Q46C14 | - | 4304430 - 4305002 | 20888.7 |
| fmde family protein | MSHOH_RS18740 | Not Available | - | 4305431 - 4307524 | 77858.8 |
| 2-phospho-l-lactate transferase | MSHOH_RS18745 | Q8TST1 | - | 4307801 - 4308730 | 33730.6 |
| hd domain-containing protein | MSHOH_RS18750 | Q58554 | + | 4309249 - 4310466 | 46606.5 |
| hypothetical protein | MSHOH_RS18755 | Not Available | + | 4310471 - 4310851 | 13621.4 |
| ubix family flavin prenyltransferase | MSHOH_RS18760 | Q9KCC2 | + | 4310851 - 4311402 | 20069.7 |
| Trna-pseudo | Not Available | Not Available | + | 4311608 - 4311682 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.