Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | MSHOH_RS18575 | Q8PVR7 | + | 4264078 - 4265820 | 65803.7 |
| dna polymerase/3'-5' exonuclease polx | MSHOH_RS18580 | P94544 | + | 4265914 - 4267668 | 65928.1 |
| diaminopimelate decarboxylase | MSHOH_RS18585 | P31851 | + | 4267781 - 4269043 | 47327.1 |
| amidohydrolase family protein | MSHOH_RS18590 | Q466Q9 | - | 4269240 - 4270538 | 47555.3 |
| helix-turn-helix transcriptional regulator | MSHOH_RS18595 | Not Available | + | 4271163 - 4271759 | 22536.3 |
| arsr family transcriptional regulator | MSHOH_RS18600 | Not Available | + | 4271869 - 4272207 | 13299.8 |
| ferredoxin domain-containing protein | MSHOH_RS18605 | Not Available | - | 4272420 - 4272980 | 20219.7 |
| hypothetical protein | MSHOH_RS25780 | Not Available | + | 4273127 - 4273258 | 5162.38 |
| glycosyltransferase | MSHOH_RS18615 | Not Available | + | 4273757 - 4274023 | 9683.43 |
| glycosyltransferase family 2 protein | MSHOH_RS18620 | Not Available | + | 4274198 - 4275166 | 34975.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.