Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system rele/pare family toxin | MSHOH_RS18425 | Not Available | + | 4226694 - 4226957 | 10570.1 |
| type ii toxin-antitoxin system hicb family antitoxin | MSHOH_RS25415 | P74641 | - | 4226917 - 4227165 | 9396.31 |
| hypothetical protein | MSHOH_RS18435 | Not Available | + | 4227914 - 4228405 | 18762.2 |
| duf3467 domain-containing protein | MSHOH_RS18440 | Not Available | + | 4228426 - 4228749 | 12641.2 |
| hypothetical protein | MSHOH_RS18445 | Not Available | - | 4228945 - 4230582 | 62361.5 |
| dead/deah box helicase | MSHOH_RS18450 | P95949 | - | 4230705 - 4233590 | 108113.0 |
| pas domain-containing sensor histidine kinase | MSHOH_RS18455 | Not Available | - | 4233844 - 4235367 | 56639.0 |
| lysine--trna ligase | MSHOH_RS18460 | Q8PVP6 | - | 4235675 - 4237219 | 59149.8 |
| pocr ligand-binding domain-containing protein | MSHOH_RS25420 | Not Available | - | 4237662 - 4240544 | 109605.0 |
| metallophosphoesterase | MSHOH_RS18470 | Not Available | - | 4241216 - 4242073 | 32036.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.