Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix-turn-helix domain-containing protein | MSHOH_RS18230 | Not Available | - | 4187579 - 4188472 | 34331.0 |
| cupredoxin domain-containing protein | MSHOH_RS22375 | Not Available | + | 4188801 - 4189511 | 26403.2 |
| aldo/keto reductase | MSHOH_RS18245 | P46905 | - | 4189801 - 4190928 | 43021.4 |
| lysylphosphatidylglycerol synthase transmembrane domain-containing protein | MSHOH_RS18250 | O57713 | + | 4191336 - 4192397 | 39691.9 |
| glycosyltransferase family 4 protein | MSHOH_RS18255 | B3LKQ3 | + | 4192373 - 4193503 | 41873.9 |
| polysaccharide deacetylase family protein | MSHOH_RS18260 | B5ZA76 | + | 4193478 - 4194185 | 27191.1 |
| carboxymuconolactone decarboxylase family protein | MSHOH_RS18265 | Not Available | + | 4194319 - 4194642 | 12334.0 |
| radical sam protein | MSHOH_RS18270 | Not Available | - | 4194710 - 4195639 | 35349.6 |
| hypothetical protein | MSHOH_RS18280 | Not Available | - | 4196065 - 4197063 | 37098.9 |
| radical sam protein | MSHOH_RS18285 | P9WJ78 | + | 4197894 - 4198964 | 40240.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.