Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease h-like domain-containing protein | MSHOH_RS18130 | Not Available | - | 4166222 - 4166971 | 28630.6 |
| malate dehydrogenase | MSHOH_RS18135 | Q8PVJ7 | + | 4167437 - 4168360 | 32830.1 |
| prc-barrel domain-containing protein | MSHOH_RS18140 | Not Available | + | 4168637 - 4168894 | 9784.92 |
| trna(his) guanylyltransferase thg1 family protein | MSHOH_RS18145 | Not Available | + | 4168915 - 4169646 | 28160.9 |
| tyrosine--trna ligase | MSHOH_RS18150 | Q8PVK0 | + | 4169684 - 4170637 | 36249.1 |
| hypothetical protein | MSHOH_RS18155 | Not Available | + | 4170812 - 4171984 | 44451.6 |
| cardb domain-containing protein | MSHOH_RS18160 | Not Available | + | 4172473 - 4174692 | 80893.5 |
| duf5518 domain-containing protein | MSHOH_RS18165 | Not Available | - | 4174757 - 4175113 | 11865.3 |
| semisweet family sugar transporter | MSHOH_RS18170 | Q89G85 | - | 4175205 - 4175516 | 10964.7 |
| hit family protein | MSHOH_RS18175 | Q58276 | + | 4175680 - 4176099 | 15240.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.