Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| formylmethanofuran dehydrogenase subunit c | MSHOH_RS18080 | Q59579 | + | 4152262 - 4153020 | 26703.1 |
| hypothetical protein | MSHOH_RS18085 | Not Available | - | 4153361 - 4153948 | 21014.2 |
| s-layer protein domain-containing protein | MSHOH_RS18090 | Q8PVI7 | - | 4154123 - 4156090 | 72440.8 |
| hypothetical protein | MSHOH_RS18095 | Not Available | + | 4157120 - 4157695 | 21349.3 |
| trna uridine(34) 5-carboxymethylaminomethyl modification radical sam/gnat enzyme elp3 | MSHOH_RS18100 | Q58536 | + | 4158104 - 4159747 | 62269.7 |
| duf1699 family protein | MSHOH_RS18105 | Not Available | + | 4161176 - 4161571 | 15208.3 |
| hypothetical protein | MSHOH_RS18110 | Not Available | + | 4162085 - 4162588 | 19562.2 |
| dhha1 domain-containing protein | MSHOH_RS18115 | Q58241 | + | 4162621 - 4164021 | 51481.4 |
| global nitrogen regulator nrprii | MSHOH_RS18120 | Q8PVJ4 | - | 4164279 - 4165037 | 27346.6 |
| glucose-6-phosphate isomerase family protein | MSHOH_RS18125 | Not Available | - | 4165270 - 4166010 | 28175.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.