Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate oxidoreductase subunit beta | MSHOH_RS17375 | O07836 | - | 3975102 - 3975704 | 21184.1 |
| indolepyruvate ferredoxin oxidoreductase subunit alpha | MSHOH_RS17380 | Q9UZ57 | - | 3975701 - 3977503 | 65142.5 |
| atp-binding protein | MSHOH_RS17385 | Not Available | - | 3977891 - 3978706 | 29998.0 |
| pas domain s-box protein | MSHOH_RS22345 | Not Available | - | 3978869 - 3981850 | 113912.0 |
| hypothetical protein | MSHOH_RS17395 | Not Available | - | 3982294 - 3982566 | 10658.7 |
| tetr/acrr family transcriptional regulator | MSHOH_RS17400 | P42105 | - | 3982675 - 3983250 | 21476.9 |
| is256 family transposase | MSHOH_RS17405 | Q8TU94 | - | 3983323 - 3983855 | 19734.2 |
| marr family winged helix-turn-helix transcriptional regulator | MSHOH_RS17410 | Not Available | + | 3984111 - 3984689 | 22169.8 |
| mfs transporter | MSHOH_RS17415 | Q5EXK5 | + | 3984761 - 3985945 | 42642.4 |
| duf134 domain-containing protein | MSHOH_RS26090 | Q8PV84 | - | 3986285 - 3986764 | 18050.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.