Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter substrate-binding protein | MSHOH_RS16955 | Not Available | + | 3889429 - 3890655 | 45914.5 |
| class i sam-dependent methyltransferase | MSHOH_RS16960 | P44150 | + | 3890716 - 3891540 | 32135.2 |
| duf5683 domain-containing protein | MSHOH_RS16965 | Not Available | + | 3891937 - 3892284 | 12650.4 |
| rna-guided endonuclease iscb | MSHOH_RS16970 | Not Available | - | 3892473 - 3893813 | 50859.7 |
| hypothetical protein | MSHOH_RS16975 | Not Available | - | 3894235 - 3894471 | 9039.45 |
| marr family winged helix-turn-helix transcriptional regulator | MSHOH_RS16980 | Not Available | + | 3895187 - 3895651 | 18183.9 |
| mate family efflux transporter | MSHOH_RS16985 | Q49VC5 | + | 3895686 - 3897092 | 50553.8 |
| abc transporter permease | MSHOH_RS16990 | Not Available | + | 3897206 - 3897466 | 9368.84 |
| cation diffusion facilitator family transporter | MSHOH_RS16995 | P94178 | - | 3897936 - 3898811 | 32456.9 |
| duf4926 domain-containing protein | MSHOH_RS17000 | Not Available | - | 3899694 - 3899948 | 9622.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.