Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-binding protein | MSHOH_RS16860 | Not Available | + | 3869281 - 3870270 | 35814.1 |
| hydrogenase maturation protease | MSHOH_RS16865 | Not Available | - | 3870413 - 3870898 | 17171.9 |
| cytochrome b | MSHOH_RS16870 | Not Available | - | 3871010 - 3871822 | 30782.8 |
| nickel-dependent hydrogenase large subunit | MSHOH_RS16875 | P31883 | - | 3871846 - 3873633 | 64559.5 |
| hydrogenase small subunit | MSHOH_RS16880 | P13063 | - | 3873641 - 3874792 | 40924.1 |
| hypc/hybg/hupf family hydrogenase formation chaperone | MSHOH_RS16885 | P0AAM9 | + | 3876096 - 3876374 | 9875.82 |
| hydrogenase formation protein hypd | MSHOH_RS16890 | Q58400 | + | 3876376 - 3877494 | 40414.8 |
| hydrogenase maturation nickel metallochaperone hypa | MSHOH_RS16895 | Q8TRN7 | + | 3877487 - 3877888 | 14661.5 |
| hydrogenase nickel incorporation protein hypb | MSHOH_RS16900 | Q57884 | + | 3878114 - 3878785 | 24939.3 |
| hydrogenase expression/formation protein hype | MSHOH_RS16905 | Q58089 | + | 3878742 - 3879887 | 40889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.