Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna(ile)(2)-agmatinylcytidine synthase | MSHOH_RS16415 | Q8PZP7 | + | 3758212 - 3759498 | 47603.3 |
| nad+ synthase | MSHOH_RS16420 | Q8PZP6 | - | 3759547 - 3760317 | 27765.4 |
| cdc48 family aaa atpase | MSHOH_RS16425 | Q9HPF0 | + | 3760873 - 3763251 | 88368.8 |
| prc-barrel domain-containing protein | MSHOH_RS16430 | Not Available | + | 3763398 - 3763652 | 9483.68 |
| helix-turn-helix transcriptional regulator | MSHOH_RS16435 | Not Available | - | 3764081 - 3764464 | 14931.2 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | MSHOH_RS22340 | O58783 | + | 3764758 - 3765723 | 36606.6 |
| gyri-like domain-containing protein | MSHOH_RS16450 | Not Available | + | 3765810 - 3766349 | 21241.1 |
| helix-hairpin-helix domain-containing protein | MSHOH_RS16455 | Not Available | + | 3766451 - 3766729 | 10927.1 |
| phzf family phenazine biosynthesis protein | MSHOH_RS16465 | Q9KG32 | + | 3767168 - 3767986 | 31006.2 |
| class i sam-dependent methyltransferase | MSHOH_RS16470 | Q9RMN9 | + | 3768541 - 3769266 | 28102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.