Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | MSHOH_RS16265 | Not Available | - | 3720472 - 3721101 | 24437.2 |
| nickel-dependent lactate racemase | MSHOH_RS16270 | Not Available | - | 3721461 - 3722726 | 46097.7 |
| nickel-dependent lactate racemase | MSHOH_RS16275 | D9TQ02 | - | 3722873 - 3724135 | 46353.5 |
| hypothetical protein | MSHOH_RS16280 | Not Available | + | 3724832 - 3726511 | 64524.2 |
| anaerobic carbon-monoxide dehydrogenase catalytic subunit | MSHOH_RS16285 | Q8TR73 | + | 3726997 - 3728898 | 69005.5 |
| metal-dependent hydrolase | MSHOH_RS16290 | Q8TR74 | - | 3729033 - 3729725 | 25001.2 |
| duf2117 family protein | MSHOH_RS16295 | Q60370 | + | 3729945 - 3731111 | 41751.6 |
| secondary thiamine-phosphate synthase enzyme yjbq | MSHOH_RS16300 | O26865 | + | 3731404 - 3731802 | 14617.5 |
| amidophosphoribosyltransferase | MSHOH_RS16305 | O29388 | - | 3731878 - 3733335 | 53068.1 |
| 50s ribosomal protein l37e | MSHOH_RS23050 | Q8PZZ8 | - | 3733385 - 3733555 | 6389.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.