Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nickel-responsive transcriptional regulator nikr | MSHOH_RS15780 | Not Available | - | 3604565 - 3604987 | 15852.1 |
| is256 family transposase | MSHOH_RS15785 | Q8TQZ1 | - | 3605940 - 3606353 | 15509.6 |
| hypothetical protein | MSHOH_RS24395 | Not Available | + | 3607478 - 3607714 | 8929.88 |
| pkd domain-containing protein | MSHOH_RS15790 | Not Available | - | 3607834 - 3610290 | 85790.2 |
| hypothetical protein | MSHOH_RS15795 | Not Available | - | 3610317 - 3611186 | 30361.2 |
| duf3344 domain-containing protein | MSHOH_RS25335 | Not Available | - | 3611307 - 3616166 | 172877.0 |
| duf3344 domain-containing protein | MSHOH_RS24740 | Not Available | - | 3617001 - 3620714 | 130351.0 |
| duf3344 domain-containing protein | MSHOH_RS15810 | Not Available | - | 3621677 - 3624445 | 98363.4 |
| ykgj family cysteine cluster protein | MSHOH_RS15815 | Not Available | + | 3625314 - 3626141 | 31740.7 |
| 3-isopropylmalate dehydratase large subunit | MSHOH_RS15820 | Q8TQZ3 | + | 3626461 - 3627747 | 46458.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.