Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | MSHOH_RS01120 | Not Available | - | 260169 - 261035 | 32532.1 |
| duf1616 domain-containing protein | MSHOH_RS01125 | Not Available | - | 261038 - 261937 | 33135.4 |
| glycosyltransferase family 2 protein | MSHOH_RS01130 | B3VA58 | + | 262830 - 263726 | 33065.5 |
| glycosyltransferase family 2 protein | MSHOH_RS01135 | Not Available | + | 263752 - 264765 | 38107.6 |
| hypothetical protein | MSHOH_RS01140 | Not Available | + | 265183 - 267204 | 76977.2 |
| glycosyltransferase family 4 protein | MSHOH_RS01145 | A0R2E2 | - | 267226 - 268416 | 44743.4 |
| glycosyltransferase family 4 protein | MSHOH_RS01150 | D6Y4U7 | + | 268616 - 269800 | 44247.0 |
| disaggregatase related repeat-containing protein | MSHOH_RS01155 | Not Available | + | 270635 - 273391 | 101259.0 |
| flippase | MSHOH_RS01160 | Not Available | + | 274220 - 275689 | 54806.7 |
| nad-dependent epimerase/dehydratase family protein | MSHOH_RS01165 | Not Available | - | 275928 - 276878 | 34570.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.