Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tigr04279 domain-containing protein | MSHOH_RS01070 | Not Available | - | 247613 - 249046 | 51780.9 |
| hypothetical protein | MSHOH_RS01075 | Not Available | - | 249254 - 249946 | 25217.3 |
| lipopolysaccharide biosynthesis protein | MSHOH_RS01080 | Not Available | - | 250435 - 251943 | 55421.7 |
| is256 family transposase | MSHOH_RS01085 | Not Available | - | 252493 - 253267 | 28645.3 |
| nucleotide sugar dehydrogenase | MSHOH_RS01090 | O59284 | - | 253331 - 254758 | 51445.2 |
| udp-n-acetylglucosamine 3-dehydrogenase | MSHOH_RS01095 | Not Available | - | 254851 - 255789 | 34539.9 |
| degt/dnrj/eryc1/strs aminotransferase family protein | MSHOH_RS01100 | P15263 | - | 255834 - 256916 | 39196.4 |
| acyltransferase | MSHOH_RS01105 | Not Available | - | 256978 - 257646 | 23920.2 |
| hypothetical protein | MSHOH_RS23305 | Not Available | - | 258207 - 258482 | 10002.0 |
| is200/is605 family element rna-guided endonuclease tnpb | MSHOH_RS01115 | Not Available | - | 258912 - 260027 | 42969.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.