Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Base plate wedge subunit | MSHOH_RS10205 | Not Available | + | 2335630 - 2336019 | 14842.9 |
| Baseplate assembly protein | MSHOH_RS10210 | Not Available | + | 2336023 - 2339670 | 136662.0 |
| orc1-type dna replication protein | MSHOH_RS00005 | Q8PXA8 | + | 969 - 2213 | 47126.2 |
| dephospho-coa kinase | MSHOH_RS00010 | P58831 | + | 2831 - 3430 | 22118.7 |
| rna-binding domain-containing protein | MSHOH_RS00015 | P58828 | + | 3549 - 4028 | 17579.0 |
| sugar phosphate isomerase/epimerase family protein | MSHOH_RS00020 | Not Available | + | 4185 - 4958 | 28906.6 |
| bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubig | MSHOH_RS00025 | Not Available | - | 5074 - 5913 | 32679.2 |
| gamma-glutamylcyclotransferase | MSHOH_RS00030 | Not Available | - | 6138 - 6620 | 19014.5 |
| elongation factor tu | MSHOH_RS00035 | Q57771 | - | 6742 - 7794 | 38454.4 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | MSHOH_RS00040 | P54602 | + | 8923 - 10650 | 61374.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.