Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | MSHOH_RS00735 | Not Available | + | 162736 - 164235 | 55384.9 |
| winged helix-turn-helix domain-containing protein | MSHOH_RS00740 | Not Available | + | 164266 - 164511 | 9453.57 |
| 4-hydroxy-tetrahydrodipicolinate reductase | MSHOH_RS00745 | Q8PXL6 | - | 165125 - 165916 | 27836.4 |
| 4-hydroxy-tetrahydrodipicolinate synthase | MSHOH_RS00750 | Q8PXL7 | - | 165913 - 166788 | 30587.1 |
| 30s ribosomal protein s17e | MSHOH_RS00755 | Q8THP2 | - | 166845 - 167039 | 7465.1 |
| hypothetical protein | MSHOH_RS00760 | Not Available | - | 167371 - 167718 | 12771.9 |
| transposase | MSHOH_RS00765 | Not Available | - | 168015 - 168428 | 16085.6 |
| heparan-alpha-glucosaminide n-acetyltransferase | MSHOH_RS00770 | Not Available | - | 168521 - 169285 | 29039.1 |
| hypothetical protein | MSHOH_RS24465 | Not Available | - | 169396 - 170358 | 35533.4 |
| cpbp family intramembrane glutamic endopeptidase | MSHOH_RS00780 | Not Available | - | 170462 - 171334 | 32514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.