Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | MSHOH_RS00540 | Q8PXJ0 | - | 125047 - 126534 | 55504.7 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | MSHOH_RS00545 | Q8PXJ1 | - | 126535 - 127962 | 51010.9 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | MSHOH_RS00550 | Q12VH0 | - | 127975 - 128256 | 10751.6 |
| osmc family protein | MSHOH_RS00555 | Not Available | + | 128682 - 129230 | 20483.6 |
| coenzyme f420 hydrogenase/dehydrogenase, beta subunit c-terminal domain | MSHOH_RS00560 | Q00391 | - | 129573 - 130736 | 43114.1 |
| methanogenesis marker 14 protein | MSHOH_RS00565 | Q58846 | + | 131511 - 132944 | 51178.8 |
| duf2098 domain-containing protein | MSHOH_RS00570 | Not Available | - | 133092 - 133418 | 12221.2 |
| gtp cyclohydrolase mpta | MSHOH_RS00575 | Q8THJ7 | - | 133695 - 134651 | 35753.1 |
| non-histone chromosomal mc1 family protein | MSHOH_RS00580 | Not Available | + | 135060 - 135344 | 10795.1 |
| acetylglutamate kinase | MSHOH_RS00585 | Q8THJ9 | + | 135571 - 136470 | 32359.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.