Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-phosphopantoate--beta-alanine ligase | MSHOH_RS05525 | Q8PUQ1 | - | 1242819 - 1243580 | 27456.2 |
| pantoate kinase | MSHOH_RS05530 | Not Available | - | 1243946 - 1244848 | 31911.1 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase coabc | MSHOH_RS05535 | Q5JF17 | - | 1245034 - 1246347 | 47407.2 |
| vms1/ankzf1 family peptidyl-trna hydrolase | MSHOH_RS05540 | Not Available | + | 1246796 - 1247839 | 39253.2 |
| c39 family peptidase | MSHOH_RS05545 | Not Available | + | 1248497 - 1249741 | 45780.3 |
| hypothetical protein | MSHOH_RS05550 | Not Available | + | 1249933 - 1250580 | 25094.7 |
| is256 family transposase | MSHOH_RS05560 | Q45618 | + | 1250781 - 1251497 | 27324.1 |
| is256 family transposase | MSHOH_RS05565 | P15026 | + | 1251484 - 1252122 | 24154.4 |
| upf0228 family protein | MSHOH_RS05570 | Q8TQF5 | + | 1252264 - 1252866 | 23555.1 |
| hypothetical protein | MSHOH_RS05575 | Not Available | + | 1253794 - 1254411 | 22490.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.