Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methyl-coenzyme m reductase operon protein d | MSHOH_RS00445 | P07958 | + | 103762 - 104274 | 19248.4 |
| methyl-coenzyme m reductase i operon protein c | MSHOH_RS00450 | P07959 | + | 104281 - 104901 | 22470.5 |
| coenzyme-b sulfoethylthiotransferase subunit gamma | MSHOH_RS00455 | P07964 | + | 104903 - 105649 | 27708.8 |
| coenzyme-b sulfoethylthiotransferase subunit alpha | MSHOH_RS00460 | Q8THH1 | + | 105660 - 107372 | 62114.7 |
| 50s ribosomal protein l11 methyltransferase | MSHOH_RS00465 | Not Available | - | 107742 - 108722 | 36322.0 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | MSHOH_RS00470 | Q8THH3 | - | 108967 - 110259 | 46052.6 |
| thymidylate synthase | MSHOH_RS00475 | Q8PXI1 | - | 110376 - 111029 | 25156.8 |
| zinc metalloprotease htpx | MSHOH_RS00480 | Q8THH5 | - | 111532 - 112392 | 30977.0 |
| hypothetical protein | MSHOH_RS24165 | Not Available | - | 112479 - 112640 | 6478.83 |
| dihydrofolate reductase family protein | MSHOH_RS00485 | P45862 | - | 112929 - 113474 | 21052.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.