Kingdom
Methanobacteriati
Phylum
Methanobacteriota
Class
Methanomicrobia
Order
Methanosarcinales
Family
Methanosarcinaceae
Genus
Methanosarcina
Description
Taxonomy
| Kingdom | Methanobacteriati |
|---|---|
| Phylum | Methanobacteriota |
| Class | Methanomicrobia |
| Order | Methanosarcinales |
| Family | Methanosarcinaceae |
| Genus | Methanosarcina |
| Species | Methanosarcina horonobensis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Methanosarcina horonobensis HB-1 = JCM 15518
Accession NumberNZ_CP009516.1
Gene Summary
Adenine Count
1463604 bp
Thymine Count
1481764 bp
Guanine Count
1033986 bp
Cytosine Count
1039253 bp
Genome Length
5018607 bp
Protein-coding Genes
4466 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gtpase hflx | MSHOH_RS04785 | Q5JGB4 | + | 1062777 - 1064057 | 48555.5 |
| php domain-containing protein | MSHOH_RS04790 | Q58982 | + | 1064826 - 1065500 | 24275.2 |
| srpbcc domain-containing protein | MSHOH_RS04795 | Not Available | + | 1065673 - 1066185 | 19669.9 |
| hypothetical protein | MSHOH_RS04800 | Not Available | + | 1066499 - 1067155 | 24913.0 |
| cupin domain-containing protein | MSHOH_RS04805 | Q59013 | + | 1067197 - 1067562 | 13475.2 |
| hypothetical protein | MSHOH_RS04810 | Not Available | - | 1067699 - 1068481 | 29389.5 |
| endonuclease/exonuclease/phosphatase family protein | MSHOH_RS04815 | Not Available | + | 1069301 - 1069870 | 22680.0 |
| atpase of the pp-loop superfamily implicated in cell cycle control | MSHOH_RS04820 | Not Available | - | 1070116 - 1071255 | 43953.2 |
| yip1 family protein | MSHOH_RS04825 | Not Available | + | 1071970 - 1073265 | 48351.7 |
| methylcobamide:com methyltransferase mtaa | MSHOH_RS04830 | Not Available | - | 1073686 - 1074723 | 37542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.