Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional trna pseudouridine(32) synthase/23s rrna pseudouridine(746) synthase rlua | X808_RS03815 | Not Available | + | 797704 - 798372 | 25257.7 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | X808_RS03820 | Not Available | - | 798395 - 798946 | 21075.0 |
| 23s rrna (adenine(2030)-n(6))-methyltransferase rlmj | X808_RS03825 | Not Available | + | 799006 - 799848 | 32384.2 |
| duf4105 domain-containing protein | X808_RS03830 | Not Available | + | 799860 - 800897 | 40766.2 |
| yqha family protein | X808_RS03835 | Not Available | + | 800906 - 801391 | 18125.0 |
| orotate phosphoribosyltransferase | X808_RS03840 | Not Available | + | 801450 - 802091 | 23715.4 |
| phosphoenolpyruvate carboxylase | X808_RS03845 | Not Available | - | 802138 - 804777 | 99526.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | X808_RS03850 | Not Available | + | 804950 - 805351 | 15008.2 |
| ygcg family protein | X808_RS03855 | Not Available | - | 805446 - 806312 | 30717.4 |
| tpm domain-containing protein | X808_RS03860 | Not Available | - | 806309 - 806767 | 17598.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.