Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-rhamnose isomerase | X808_RS11200 | Not Available | + | 1158993 - 1159239 | 8623.3 |
| dmt family transporter | X808_RS05450 | Not Available | - | 1159354 - 1160244 | 32341.4 |
| tatd family hydrolase | X808_RS05455 | Not Available | - | 1160259 - 1161014 | 29091.0 |
| transcriptional regulator | X808_RS05460 | Not Available | + | 1161098 - 1161430 | 12110.2 |
| lpo_1073/vpar_1526 family protein | X808_RS10730 | Not Available | - | 1161562 - 1162494 | 35453.5 |
| hypothetical protein | X808_RS05470 | Not Available | - | 1162481 - 1162747 | 9401.48 |
| excinuclease abc subunit uvrb | X808_RS05475 | Not Available | - | 1162749 - 1164767 | 76437.7 |
| iron uptake system protein efeo | X808_RS05480 | Not Available | + | 1164942 - 1165751 | 30278.1 |
| iron uptake transporter deferrochelatase/peroxidase subunit | X808_RS05485 | Not Available | + | 1165765 - 1166955 | 44354.2 |
| hypothetical protein | X808_RS05490 | Not Available | + | 1166966 - 1167586 | 23270.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.