Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-cys | Not Available | Not Available | + | 920209 - 920282 | Not Available |
| Trna-met | Not Available | Not Available | + | 975386 - 975462 | Not Available |
| ribosome maturation factor rimp | X808_RS04715 | Not Available | + | 975690 - 976151 | 17455.9 |
| transcription termination factor nusa | X808_RS04720 | Not Available | + | 976172 - 977668 | 55368.2 |
| translation initiation factor if-2 | X808_RS04725 | Not Available | + | 977690 - 980236 | 92097.3 |
| 30s ribosome-binding factor rbfa | X808_RS04730 | Not Available | + | 980347 - 980727 | 14489.6 |
| trna pseudouridine(55) synthase trub | X808_RS04735 | Not Available | + | 980730 - 981653 | 34344.6 |
| lytic transglycosylase domain-containing protein | X808_RS04740 | Not Available | + | 981656 - 982741 | 40299.8 |
| trna adenosine(34) deaminase tada | X808_RS04745 | Not Available | - | 982773 - 983294 | 19408.4 |
| dead/deah box helicase | X808_RS04750 | Not Available | - | 983376 - 985205 | 69173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.