Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ycjx family protein | X808_RS04115 | Not Available | - | 863855 - 865264 | 54766.2 |
| inorganic triphosphatase | X808_RS04120 | Not Available | + | 865325 - 866173 | 32482.0 |
| hypothetical protein | X808_RS04125 | Not Available | - | 866206 - 866682 | 17435.2 |
| yoah family protein | X808_RS10830 | Not Available | - | 866675 - 866839 | 6077.33 |
| trna pseudouridine(65) synthase truc | X808_RS04130 | Not Available | - | 866857 - 867585 | 28458.4 |
| yqcc family protein | X808_RS04135 | Not Available | - | 867683 - 867994 | 11889.6 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | X808_RS04140 | Not Available | + | 868086 - 869504 | 52392.8 |
| bifunctional trna (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase mnmd/fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmc | X808_RS04145 | Not Available | + | 869719 - 871719 | 75464.2 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | X808_RS04150 | Not Available | - | 871764 - 872558 | 28557.7 |
| 3-hydroxyacyl-acp dehydratase fabz | X808_RS04155 | Not Available | - | 872592 - 873002 | 15438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.