Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nucleoside-diphosphate kinase | X808_RS03765 | Not Available | - | 785339 - 785755 | 15469.7 |
| methionine--trna ligase | X808_RS03770 | Not Available | - | 785765 - 787849 | 78537.6 |
| o-succinylbenzoate synthase | X808_RS03775 | Not Available | + | 787993 - 788949 | 35491.7 |
| 16s rrna pseudouridine(516) synthase rsua | X808_RS03780 | Not Available | + | 789052 - 789744 | 26325.3 |
| bcr/cfla family multidrug efflux mfs transporter | X808_RS03785 | Not Available | + | 789744 - 790928 | 42651.9 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | X808_RS03790 | Not Available | - | 790930 - 792246 | 49443.1 |
| anti-phage deoxyguanosine triphosphatase | X808_RS03795 | Not Available | + | 792317 - 793654 | 51435.5 |
| hypothetical protein | X808_RS03800 | Not Available | + | 793715 - 794074 | 13500.0 |
| hypothetical protein | X808_RS03805 | Not Available | + | 794260 - 794625 | 13677.2 |
| rna polymerase-associated protein rapa | X808_RS03810 | Not Available | + | 794776 - 797688 | 109697.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.