Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | X808_RS02760 | Not Available | - | 579190 - 580785 | 59458.7 |
| l-rhamnose isomerase | X808_RS02765 | Not Available | - | 580795 - 581646 | 31522.2 |
| oligopeptide abc transporter permease oppb | X808_RS02770 | Not Available | - | 581705 - 582628 | 33997.7 |
| spermidine/putrescine abc transporter permease potc | X808_RS02775 | Not Available | - | 582842 - 583609 | 28373.0 |
| spermidine/putrescine abc transporter permease potb | X808_RS02780 | Not Available | - | 583609 - 584472 | 32045.7 |
| spermidine/putrescine abc transporter atp-binding protein pota | X808_RS02785 | Not Available | - | 584459 - 585574 | 41715.2 |
| type ii toxin-antitoxin system hica family toxin | X808_RS02790 | Not Available | + | 585889 - 586164 | 10261.5 |
| type ii toxin-antitoxin system hicb family antitoxin | X808_RS02795 | Not Available | + | 586157 - 586486 | 12310.7 |
| dna helicase rep | X808_RS02800 | Not Available | + | 586593 - 588611 | 77714.4 |
| aminoacyl-histidine dipeptidase | X808_RS02805 | Not Available | - | 588658 - 590112 | 52894.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.