Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | + | 1671579 - 1674479 | Not Available |
| Trna-ala | Not Available | Not Available | + | 1674713 - 1674788 | Not Available |
| Trna-ile | Not Available | Not Available | + | 1674861 - 1674937 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | + | 1675044 - 1676583 | Not Available |
| exodeoxyribonuclease v subunit alpha | X808_RS07900 | Not Available | - | 1676940 - 1678988 | 77611.6 |
| alanine racemase | X808_RS07905 | Not Available | + | 1679104 - 1680228 | 41911.7 |
| superoxide dismutase | X808_RS07910 | Not Available | - | 1680307 - 1680948 | 23725.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | X808_RS07915 | Not Available | + | 1681314 - 1683770 | 88272.9 |
| homoserine kinase | X808_RS07920 | Not Available | + | 1683770 - 1684717 | 34715.9 |
| duf2813 domain-containing protein | X808_RS07925 | Not Available | - | 1684779 - 1686323 | 60464.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.