Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | X808_RS07630 | Not Available | - | 1616384 - 1617664 | 47974.0 |
| trna 5-hydroxyuridine modification protein yegq | X808_RS07635 | Not Available | - | 1617782 - 1619161 | 52408.7 |
| cytochrome b562 | X808_RS07640 | Not Available | + | 1619315 - 1619686 | 13807.1 |
| dna polymerase iii subunit alpha | X808_RS07645 | Not Available | - | 1619731 - 1623207 | 129647.0 |
| lps export abc transporter permease lptg | X808_RS07650 | Not Available | - | 1623292 - 1624389 | 40640.2 |
| lps export abc transporter permease lptf | X808_RS07655 | Not Available | - | 1624389 - 1625498 | 40738.5 |
| hypothetical protein | X808_RS07660 | Not Available | - | 1625679 - 1626578 | 33394.4 |
| leucyl aminopeptidase | X808_RS07665 | Not Available | + | 1626700 - 1628196 | 54186.2 |
| cysteine synthase a | X808_RS07670 | Not Available | + | 1628385 - 1629332 | 33269.2 |
| dna-binding transcriptional repressor deor | X808_RS07675 | Not Available | - | 1629387 - 1630130 | 27858.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.