Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tir domain-containing protein | X808_RS07085 | Not Available | - | 1505219 - 1505608 | 15109.1 |
| tir domain-containing protein | X808_RS07090 | Not Available | - | 1505714 - 1506118 | 15611.7 |
| crispr-associated helicase/endonuclease cas3 | X808_RS07095 | Not Available | - | 1506251 - 1508539 | 86005.8 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | X808_RS07100 | Not Available | + | 1508719 - 1510482 | 66657.2 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | X808_RS07105 | Not Available | + | 1510561 - 1511523 | 36361.0 |
| hth-type transcriptional activator ilvy | X808_RS07110 | Not Available | - | 1511594 - 1512481 | 33770.0 |
| glycosyltransferase family 9 protein | X808_RS07115 | Not Available | - | 1512483 - 1513514 | 39987.1 |
| glycosyltransferase family 9 protein | X808_RS07120 | Not Available | + | 1513563 - 1514606 | 39586.3 |
| 50s ribosomal protein l31 | X808_RS07125 | Not Available | - | 1514664 - 1514876 | 7791.34 |
| transketolase | X808_RS07130 | Not Available | + | 1515247 - 1517253 | 73310.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.