Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pasteurellales
Family
Pasteurellaceae
Genus
Mannheimia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pasteurellales |
| Family | Pasteurellaceae |
| Genus | Mannheimia |
| Species | Mannheimia varigena |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Mannheimia varigena USDA-ARS-USMARC-1296
Accession NumberNZ_CP006943.1
Gene Summary
Adenine Count
667902 bp
Thymine Count
668304 bp
Guanine Count
455835 bp
Cytosine Count
453197 bp
Genome Length
2245238 bp
Protein-coding Genes
2011 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crispr-associated endonuclease cas2 | X808_RS07035 | Not Available | - | 1496642 - 1496935 | 11500.9 |
| type i-c crispr-associated endonuclease cas1c | X808_RS07040 | Not Available | - | 1496985 - 1497998 | 38215.2 |
| hypothetical protein | X808_RS07045 | Not Available | - | 1498044 - 1498385 | 13534.0 |
| hypothetical protein | X808_RS07050 | Not Available | - | 1498455 - 1498637 | 7225.74 |
| rna-directed dna polymerase | X808_RS07055 | Not Available | - | 1498646 - 1500124 | 57179.5 |
| crispr-associated protein cas4 | X808_RS07060 | Not Available | - | 1500157 - 1500828 | 25123.4 |
| type i-c crispr-associated protein cas7/csd2 | X808_RS07065 | Not Available | - | 1500828 - 1501691 | 32723.1 |
| type i-c crispr-associated protein cas8c/csd1 | X808_RS07070 | Not Available | - | 1501701 - 1503479 | 65871.5 |
| type i-c crispr-associated protein cas5c | X808_RS07075 | Not Available | - | 1503476 - 1504153 | 25884.3 |
| duf4231 domain-containing protein | X808_RS07080 | Not Available | - | 1504346 - 1505209 | 33077.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.